My toilet runs about every 5 minutes for about 3 or 4 seconds. Ive replaced the flapper twice and now Im trying the Fluidmaster flapper/seat replacement – but it has not stopped the problem. Ive tried putting a bead of silicone around the flapper/seat to try to get a seal, but nothing seems to work for me.After the toilet stops, I shut off the water supply and the water drains down about an inch or two then stops. Any ideas why it does not drain all the way down? Is the flapper seal not the problem?Thanks.